Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Q3U1D9 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.36□□□□□ -0.75
Q3U1D9 Gm29499-201ENSMUST00000189151 486 ntBASIC10.36□□□□□ -0.75
Q3U1D9 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Q3U1D9 Gm28329-201ENSMUST00000191208 689 ntBASIC10.36□□□□□ -0.75
Q3U1D9 Gm29171-201ENSMUST00000191397 486 ntBASIC10.36□□□□□ -0.75
Q3U1D9 Mir7686-201ENSMUST00000200604 57 ntBASIC10.36□□□□□ -0.75
Q3U1D9 Gm43916-201ENSMUST00000205062 967 ntBASIC10.36□□□□□ -0.75
Q3U1D9 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Q3U1D9 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.36□□□□□ -0.75
Q3U1D9 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.36□□□□□ -0.75
Q3U1D9 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Q3U1D9 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Q3U1D9 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Q3U1D9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Q3U1D9 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Q3U1D9 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Q3U1D9 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Q3U1D9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Q3U1D9 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.36□□□□□ -0.75
Q3U1D9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Q3U1D9 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Q3U1D9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Q3U1D9 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.35□□□□□ -0.75
Q3U1D9 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.35□□□□□ -0.75
Q3U1D9 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Q3U1D9 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC10.35□□□□□ -0.75
Q3U1D9 Gm13916-201ENSMUST00000117368 628 ntBASIC10.35□□□□□ -0.75
Q3U1D9 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.35□□□□□ -0.75
Q3U1D9 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.35□□□□□ -0.75
Q3U1D9 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.35□□□□□ -0.75
Q3U1D9 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.35□□□□□ -0.75
Q3U1D9 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Q3U1D9 Gm7467-201ENSMUST00000185173 652 ntBASIC10.35□□□□□ -0.75
Q3U1D9 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Gm37835-201ENSMUST00000193305 361 ntBASIC10.35□□□□□ -0.75
Q3U1D9 Gm5714-201ENSMUST00000197343 566 ntBASIC10.35□□□□□ -0.75
Q3U1D9 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Gm45770-201ENSMUST00000212105 616 ntBASIC10.35□□□□□ -0.75
Q3U1D9 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.35□□□□□ -0.75
Q3U1D9 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Gm10179-201ENSMUST00000086233 688 ntBASIC10.35□□□□□ -0.75
Q3U1D9 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Paupar-201ENSMUST00000194826 3482 ntBASIC10.35□□□□□ -0.75
Q3U1D9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Q3U1D9 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Q3U1D9 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Q3U1D9 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Q3U1D9 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.34□□□□□ -0.75
Q3U1D9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.34□□□□□ -0.75
Q3U1D9 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Q3U1D9 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Q3U1D9 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Q3U1D9 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.34□□□□□ -0.75
Q3U1D9 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Q3U1D9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Q3U1D9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Q3U1D9 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Q3U1D9 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Q3U1D9 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Q3U1D9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Q3U1D9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.34□□□□□ -0.75
Q3U1D9 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Q3U1D9 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Q3U1D9 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Q3U1D9 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Q3U1D9 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Q3U1D9 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Q3U1D9 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Q3U1D9 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.34□□□□□ -0.75
Q3U1D9 Gm12036-201ENSMUST00000120008 530 ntBASIC10.34□□□□□ -0.75
Q3U1D9 Gm15566-201ENSMUST00000121130 590 ntBASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms