Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Gm11439-201ENSMUST00000118598 409 ntBASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Gm12058-201ENSMUST00000118614 437 ntBASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Gm37201-201ENSMUST00000191845 523 ntBASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Gm43002-201ENSMUST00000200310 155 ntBASIC12.62□□□□□ -0.39
Trim43aQ3TL54 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43aQ3TL54 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Gm14441-201ENSMUST00000121960 540 ntBASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.61□□□□□ -0.39
Trim43aQ3TL54 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.61□□□□□ -0.39
Trim43aQ3TL54 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43aQ3TL54 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms