Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Pdlim7Q3TJD7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Gm11560-201ENSMUST00000117567 948 ntBASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Gm13019-201ENSMUST00000120000 276 ntBASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Gm11244-201ENSMUST00000121243 237 ntBASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Gm8451-201ENSMUST00000170338 447 ntBASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Gm6450-201ENSMUST00000200896 574 ntBASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 AC153962.2-201ENSMUST00000219417 550 ntBASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Gm7536-201ENSMUST00000077389 444 ntBASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Gm5453-201ENSMUST00000080866 447 ntBASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim7Q3TJD7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Gm11578-201ENSMUST00000118530 459 ntBASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Gm7719-201ENSMUST00000182374 975 ntBASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Gm5700-201ENSMUST00000191483 989 ntBASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Gm30671-201ENSMUST00000214898 318 ntBASIC13.28□□□□□ -0.28
Pdlim7Q3TJD7 Gm6390-201ENSMUST00000215034 589 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms