Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Gm9463-201ENSMUST00000206707 601 ntBASIC12.11□□□□□ -0.47
Ebf1Q07802 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.11□□□□□ -0.47
Ebf1Q07802 Gm9132-201ENSMUST00000210182 832 ntBASIC12.11□□□□□ -0.47
Ebf1Q07802 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.11□□□□□ -0.47
Ebf1Q07802 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.11□□□□□ -0.47
Ebf1Q07802 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ebf1Q07802 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ebf1Q07802 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.11□□□□□ -0.47
Ebf1Q07802 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ebf1Q07802 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.11□□□□□ -0.47
Ebf1Q07802 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ebf1Q07802 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.11□□□□□ -0.47
Ebf1Q07802 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.11□□□□□ -0.47
Ebf1Q07802 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ebf1Q07802 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.1□□□□□ -0.47
Ebf1Q07802 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Gm7722-201ENSMUST00000120646 741 ntBASIC12.1□□□□□ -0.47
Ebf1Q07802 Gm8199-201ENSMUST00000121323 823 ntBASIC12.1□□□□□ -0.47
Ebf1Q07802 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.1□□□□□ -0.47
Ebf1Q07802 Rprl1-201ENSMUST00000158050 327 ntBASIC12.1□□□□□ -0.47
Ebf1Q07802 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.1□□□□□ -0.47
Ebf1Q07802 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ebf1Q07802 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Gm17831-201ENSMUST00000205579 900 ntBASIC12.1□□□□□ -0.47
Ebf1Q07802 Gm4607-201ENSMUST00000206649 577 ntBASIC12.1□□□□□ -0.47
Ebf1Q07802 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.1□□□□□ -0.47
Ebf1Q07802 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.1□□□□□ -0.47
Ebf1Q07802 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ebf1Q07802 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Ebf1Q07802 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.1□□□□□ -0.47
Ebf1Q07802 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ebf1Q07802 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.1□□□□□ -0.47
Ebf1Q07802 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ebf1Q07802 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf1Q07802 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.09□□□□□ -0.47
Ebf1Q07802 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.09□□□□□ -0.47
Ebf1Q07802 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.09□□□□□ -0.47
Ebf1Q07802 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ebf1Q07802 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Gm11509-201ENSMUST00000117358 325 ntBASIC12.09□□□□□ -0.47
Ebf1Q07802 Gm12795-201ENSMUST00000117594 539 ntBASIC12.09□□□□□ -0.47
Ebf1Q07802 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.09□□□□□ -0.47
Ebf1Q07802 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.09□□□□□ -0.47
Ebf1Q07802 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Ebf1Q07802 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.09□□□□□ -0.47
Ebf1Q07802 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.09□□□□□ -0.47
Ebf1Q07802 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ebf1Q07802 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.09□□□□□ -0.47
Ebf1Q07802 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.09□□□□□ -0.47
Ebf1Q07802 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms