Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.02□□□□□ -0.65
Cacna1aP97445 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cacna1aP97445 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.02□□□□□ -0.65
Cacna1aP97445 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.02□□□□□ -0.65
Cacna1aP97445 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Cacna1aP97445 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.02□□□□□ -0.65
Cacna1aP97445 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC11.02□□□□□ -0.65
Cacna1aP97445 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.02□□□□□ -0.65
Cacna1aP97445 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.02□□□□□ -0.65
Cacna1aP97445 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Cacna1aP97445 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.02□□□□□ -0.65
Cacna1aP97445 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cacna1aP97445 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC11.01□□□□□ -0.65
Cacna1aP97445 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cacna1aP97445 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.01□□□□□ -0.65
Cacna1aP97445 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.01□□□□□ -0.65
Cacna1aP97445 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cacna1aP97445 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cacna1aP97445 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cacna1aP97445 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cacna1aP97445 Gm18711-201ENSMUST00000199341 750 ntBASIC11.01□□□□□ -0.65
Cacna1aP97445 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cacna1aP97445 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cacna1aP97445 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cacna1aP97445 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cacna1aP97445 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.01□□□□□ -0.65
Cacna1aP97445 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.01□□□□□ -0.65
Cacna1aP97445 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cacna1aP97445 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cacna1aP97445 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.01□□□□□ -0.65
Cacna1aP97445 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.01□□□□□ -0.65
Cacna1aP97445 Gm16305-201ENSMUST00000140747 556 ntBASIC11.01□□□□□ -0.65
Cacna1aP97445 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.01□□□□□ -0.65
Cacna1aP97445 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.01□□□□□ -0.65
Cacna1aP97445 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cacna1aP97445 Gm16380-201ENSMUST00000077997 478 ntBASIC11.01□□□□□ -0.65
Cacna1aP97445 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11□□□□□ -0.65
Cacna1aP97445 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11□□□□□ -0.65
Cacna1aP97445 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cacna1aP97445 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cacna1aP97445 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Cacna1aP97445 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Cacna1aP97445 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cacna1aP97445 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cacna1aP97445 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cacna1aP97445 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11□□□□□ -0.65
Cacna1aP97445 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cacna1aP97445 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cacna1aP97445 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cacna1aP97445 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cacna1aP97445 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11□□□□□ -0.65
Cacna1aP97445 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11□□□□□ -0.65
Cacna1aP97445 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cacna1aP97445 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Cacna1aP97445 Gm14234-201ENSMUST00000119539 845 ntBASIC11□□□□□ -0.65
Cacna1aP97445 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms