Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NcanP55066 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NcanP55066 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NcanP55066 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC12.5□□□□□ -0.41
NcanP55066 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
NcanP55066 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
NcanP55066 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC12.5□□□□□ -0.41
NcanP55066 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC12.5□□□□□ -0.41
NcanP55066 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.5□□□□□ -0.41
NcanP55066 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
NcanP55066 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NcanP55066 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.5□□□□□ -0.41
NcanP55066 AC152169.1-201ENSMUST00000223901 701 ntBASIC12.5□□□□□ -0.41
NcanP55066 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.5□□□□□ -0.41
NcanP55066 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NcanP55066 Gm42432-201ENSMUST00000197902 1617 ntBASIC12.5□□□□□ -0.41
NcanP55066 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.5□□□□□ -0.41
NcanP55066 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.5□□□□□ -0.41
NcanP55066 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.5□□□□□ -0.41
NcanP55066 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NcanP55066 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
NcanP55066 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.49□□□□□ -0.41
NcanP55066 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Gm5395-201ENSMUST00000121650 915 ntBASIC12.49□□□□□ -0.41
NcanP55066 Mir1905-201ENSMUST00000122779 82 ntBASIC12.49□□□□□ -0.41
NcanP55066 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Gm25492-201ENSMUST00000157383 129 ntBASIC12.49□□□□□ -0.41
NcanP55066 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.49□□□□□ -0.41
NcanP55066 Gm26976-201ENSMUST00000182929 908 ntBASIC12.49□□□□□ -0.41
NcanP55066 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC12.49□□□□□ -0.41
NcanP55066 Gm43506-201ENSMUST00000200675 753 ntBASIC12.49□□□□□ -0.41
NcanP55066 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.49□□□□□ -0.41
NcanP55066 Gm7525-201ENSMUST00000219425 454 ntBASIC12.49□□□□□ -0.41
NcanP55066 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.49□□□□□ -0.41
NcanP55066 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
NcanP55066 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NcanP55066 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NcanP55066 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NcanP55066 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NcanP55066 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.49□□□□□ -0.41
NcanP55066 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NcanP55066 Grk6-205ENSMUST00000224653 2976 ntBASIC12.48□□□□□ -0.41
NcanP55066 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
NcanP55066 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.48□□□□□ -0.41
NcanP55066 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NcanP55066 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms