Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Gm5455-201ENSMUST00000058710 715 ntBASIC11.87□□□□□ -0.51
Atxn1P54254 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Atxn1P54254 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Atxn1P54254 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.86□□□□□ -0.51
Atxn1P54254 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Pck2-205ENSMUST00000226352 2784 ntBASIC11.86□□□□□ -0.51
Atxn1P54254 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Atxn1P54254 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Atxn1P54254 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.86□□□□□ -0.51
Atxn1P54254 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.86□□□□□ -0.51
Atxn1P54254 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.86□□□□□ -0.51
Atxn1P54254 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Gm10731-201ENSMUST00000181171 448 ntBASIC11.86□□□□□ -0.51
Atxn1P54254 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.86□□□□□ -0.51
Atxn1P54254 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Atxn1P54254 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.86□□□□□ -0.51
Atxn1P54254 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Atxn1P54254 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Atxn1P54254 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Atxn1P54254 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.86□□□□□ -0.51
Atxn1P54254 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atxn1P54254 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.85□□□□□ -0.51
Atxn1P54254 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Atxn1P54254 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Atxn1P54254 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Atxn1P54254 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Atxn1P54254 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Atxn1P54254 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Atxn1P54254 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Gm11949-201ENSMUST00000117640 372 ntBASIC11.85□□□□□ -0.51
Atxn1P54254 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.85□□□□□ -0.51
Atxn1P54254 Gm13022-201ENSMUST00000121181 285 ntBASIC11.85□□□□□ -0.51
Atxn1P54254 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.85□□□□□ -0.51
Atxn1P54254 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.85□□□□□ -0.51
Atxn1P54254 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.85□□□□□ -0.51
Atxn1P54254 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Gm25604-201ENSMUST00000158359 133 ntBASIC11.85□□□□□ -0.51
Atxn1P54254 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Atxn1P54254 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.85□□□□□ -0.51
Atxn1P54254 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Atxn1P54254 Mir8115-201ENSMUST00000184992 119 ntBASIC11.85□□□□□ -0.51
Atxn1P54254 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Gm18204-201ENSMUST00000209835 793 ntBASIC11.85□□□□□ -0.51
Atxn1P54254 Gm4157-201ENSMUST00000211647 679 ntBASIC11.85□□□□□ -0.51
Atxn1P54254 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.85□□□□□ -0.51
Atxn1P54254 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.85□□□□□ -0.51
Atxn1P54254 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Atxn1P54254 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Atxn1P54254 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms