Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
Pdx1P52946 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.76□□□□□ -0.53
Pdx1P52946 Gm9192-201ENSMUST00000183221 985 ntBASIC11.76□□□□□ -0.53
Pdx1P52946 Gm27341-201ENSMUST00000183570 106 ntBASIC11.76□□□□□ -0.53
Pdx1P52946 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pdx1P52946 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.76□□□□□ -0.53
Pdx1P52946 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.76□□□□□ -0.53
Pdx1P52946 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.76□□□□□ -0.53
Pdx1P52946 Gm19287-201ENSMUST00000203190 358 ntBASIC11.76□□□□□ -0.53
Pdx1P52946 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.76□□□□□ -0.53
Pdx1P52946 Gm18212-201ENSMUST00000211678 889 ntBASIC11.76□□□□□ -0.53
Pdx1P52946 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.76□□□□□ -0.53
Pdx1P52946 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.76□□□□□ -0.53
Pdx1P52946 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pdx1P52946 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.76□□□□□ -0.53
Pdx1P52946 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
Pdx1P52946 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pdx1P52946 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Pdx1P52946 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Pdx1P52946 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Pdx1P52946 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pdx1P52946 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.75□□□□□ -0.53
Pdx1P52946 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.75□□□□□ -0.53
Pdx1P52946 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Gm15236-201ENSMUST00000117309 379 ntBASIC11.75□□□□□ -0.53
Pdx1P52946 Gm11439-201ENSMUST00000118598 409 ntBASIC11.75□□□□□ -0.53
Pdx1P52946 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Gm12997-201ENSMUST00000120207 640 ntBASIC11.75□□□□□ -0.53
Pdx1P52946 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Gm24990-201ENSMUST00000157406 323 ntBASIC11.75□□□□□ -0.53
Pdx1P52946 Gm4157-201ENSMUST00000211647 679 ntBASIC11.75□□□□□ -0.53
Pdx1P52946 Gm9797-202ENSMUST00000218003 294 ntBASIC11.75□□□□□ -0.53
Pdx1P52946 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Pdx1P52946 Mir433-201ENSMUST00000093564 124 ntBASIC11.75□□□□□ -0.53
Pdx1P52946 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Pdx1P52946 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.75□□□□□ -0.53
Pdx1P52946 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdx1P52946 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Pdx1P52946 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Pdx1P52946 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.74□□□□□ -0.53
Pdx1P52946 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pdx1P52946 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.74□□□□□ -0.53
Pdx1P52946 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Pdx1P52946 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pdx1P52946 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pdx1P52946 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pdx1P52946 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Pdx1P52946 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pdx1P52946 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pdx1P52946 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pdx1P52946 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms