Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm13408-201ENSMUST00000119822 798 ntBASIC11.31□□□□□ -0.6
RoraP51448 Gm13935-201ENSMUST00000121859 798 ntBASIC11.31□□□□□ -0.6
RoraP51448 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.31□□□□□ -0.6
RoraP51448 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.31□□□□□ -0.6
RoraP51448 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.31□□□□□ -0.6
RoraP51448 Gm24514-201ENSMUST00000174961 285 ntBASIC11.31□□□□□ -0.6
RoraP51448 Gm27530-201ENSMUST00000184096 98 ntBASIC11.31□□□□□ -0.6
RoraP51448 Gm5733-201ENSMUST00000190232 939 ntBASIC11.31□□□□□ -0.6
RoraP51448 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.31□□□□□ -0.6
RoraP51448 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.31□□□□□ -0.6
RoraP51448 Gm8956-201ENSMUST00000203939 825 ntBASIC11.31□□□□□ -0.6
RoraP51448 Gm45118-201ENSMUST00000208928 825 ntBASIC11.31□□□□□ -0.6
RoraP51448 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.31□□□□□ -0.6
RoraP51448 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.31□□□□□ -0.6
RoraP51448 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.31□□□□□ -0.6
RoraP51448 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Ntng1-201ENSMUST00000051253 327 ntBASIC11.31□□□□□ -0.6
RoraP51448 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
RoraP51448 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
RoraP51448 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
RoraP51448 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
RoraP51448 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.31□□□□□ -0.6
RoraP51448 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RoraP51448 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
RoraP51448 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
RoraP51448 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.3□□□□□ -0.6
RoraP51448 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
RoraP51448 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Gm12857-201ENSMUST00000117678 592 ntBASIC11.3□□□□□ -0.6
RoraP51448 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Gm23085-201ENSMUST00000157849 293 ntBASIC11.3□□□□□ -0.6
RoraP51448 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.3□□□□□ -0.6
RoraP51448 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.3□□□□□ -0.6
RoraP51448 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.3□□□□□ -0.6
RoraP51448 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.3□□□□□ -0.6
RoraP51448 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.3□□□□□ -0.6
RoraP51448 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
RoraP51448 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.3□□□□□ -0.6
RoraP51448 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
RoraP51448 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
RoraP51448 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
RoraP51448 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.3□□□□□ -0.6
RoraP51448 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
RoraP51448 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.3□□□□□ -0.6
RoraP51448 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RoraP51448 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
RoraP51448 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RoraP51448 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.29□□□□□ -0.6
RoraP51448 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RoraP51448 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms