Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SftpdP50404 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.53□□□□□ -0.4
SftpdP50404 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SftpdP50404 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SftpdP50404 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.52□□□□□ -0.4
SftpdP50404 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SftpdP50404 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SftpdP50404 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SftpdP50404 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.52□□□□□ -0.4
SftpdP50404 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SftpdP50404 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.52□□□□□ -0.41
SftpdP50404 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
SftpdP50404 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Gm23949-201ENSMUST00000104027 127 ntBASIC12.52□□□□□ -0.41
SftpdP50404 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.52□□□□□ -0.41
SftpdP50404 Gm15711-201ENSMUST00000118889 535 ntBASIC12.52□□□□□ -0.41
SftpdP50404 Gm14017-201ENSMUST00000121934 386 ntBASIC12.52□□□□□ -0.41
SftpdP50404 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.52□□□□□ -0.41
SftpdP50404 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.52□□□□□ -0.41
SftpdP50404 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Gm18038-201ENSMUST00000197900 485 ntBASIC12.52□□□□□ -0.41
SftpdP50404 Gm18212-201ENSMUST00000211678 889 ntBASIC12.52□□□□□ -0.41
SftpdP50404 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SftpdP50404 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SftpdP50404 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SftpdP50404 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.52□□□□□ -0.41
SftpdP50404 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SftpdP50404 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.52□□□□□ -0.41
SftpdP50404 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpdP50404 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
SftpdP50404 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.51□□□□□ -0.41
SftpdP50404 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.51□□□□□ -0.41
SftpdP50404 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.51□□□□□ -0.41
SftpdP50404 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
SftpdP50404 Gm14208-201ENSMUST00000119645 678 ntBASIC12.51□□□□□ -0.41
SftpdP50404 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.51□□□□□ -0.41
SftpdP50404 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.51□□□□□ -0.41
SftpdP50404 Gm2383-201ENSMUST00000181461 807 ntBASIC12.51□□□□□ -0.41
SftpdP50404 Gm9192-201ENSMUST00000183221 985 ntBASIC12.51□□□□□ -0.41
SftpdP50404 Mir7677-201ENSMUST00000184226 67 ntBASIC12.51□□□□□ -0.41
SftpdP50404 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SftpdP50404 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
SftpdP50404 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.51□□□□□ -0.41
SftpdP50404 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 Gm270-201ENSMUST00000223010 976 ntBASIC12.51□□□□□ -0.41
SftpdP50404 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.51□□□□□ -0.41
SftpdP50404 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.51□□□□□ -0.41
SftpdP50404 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.51□□□□□ -0.41
SftpdP50404 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpdP50404 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpdP50404 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpdP50404 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.5□□□□□ -0.41
SftpdP50404 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpdP50404 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpdP50404 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.5□□□□□ -0.41
SftpdP50404 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SftpdP50404 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpdP50404 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SftpdP50404 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpdP50404 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
SftpdP50404 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms