Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Col18a1P39061 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.39■□□□□ 0.05
Col18a1P39061 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 Gm44124-201ENSMUST00000204159 472 ntBASIC15.39■□□□□ 0.05
Col18a1P39061 Gm29689-201ENSMUST00000221076 589 ntBASIC15.39■□□□□ 0.05
Col18a1P39061 AC134913.2-201ENSMUST00000225017 771 ntBASIC15.39■□□□□ 0.05
Col18a1P39061 Gm5278-201ENSMUST00000055957 552 ntBASIC15.39■□□□□ 0.05
Col18a1P39061 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Col18a1P39061 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.39■□□□□ 0.05
Col18a1P39061 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Col18a1P39061 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC15.39■□□□□ 0.05
Col18a1P39061 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 Gm5526-201ENSMUST00000153604 423 ntBASIC15.39■□□□□ 0.05
Col18a1P39061 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC15.39■□□□□ 0.05
Col18a1P39061 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Col18a1P39061 Gm18256-201ENSMUST00000209087 907 ntBASIC15.39■□□□□ 0.05
Col18a1P39061 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 AC140314.1-201ENSMUST00000219549 554 ntBASIC15.39■□□□□ 0.05
Col18a1P39061 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC15.39■□□□□ 0.05
Col18a1P39061 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC15.39■□□□□ 0.05
Col18a1P39061 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col18a1P39061 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm5159-201ENSMUST00000212733 1652 ntBASIC15.38■□□□□ 0.05
Col18a1P39061 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC15.38■□□□□ 0.05
Col18a1P39061 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Col18a1P39061 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm37858-201ENSMUST00000192759 1231 ntBASIC15.38■□□□□ 0.05
Col18a1P39061 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC15.38■□□□□ 0.05
Col18a1P39061 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.38■□□□□ 0.05
Col18a1P39061 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Col18a1P39061 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.38■□□□□ 0.05
Col18a1P39061 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Col18a1P39061 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col18a1P39061 Nudt13-207ENSMUST00000224311 1574 ntBASIC15.37■□□□□ 0.05
Col18a1P39061 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col18a1P39061 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col18a1P39061 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col18a1P39061 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col18a1P39061 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col18a1P39061 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Col18a1P39061 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col18a1P39061 Gm12947-201ENSMUST00000116114 420 ntBASIC15.37■□□□□ 0.05
Col18a1P39061 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC15.37■□□□□ 0.05
Col18a1P39061 Gm6291-201ENSMUST00000179994 309 ntBASIC15.37■□□□□ 0.05
Col18a1P39061 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col18a1P39061 Gm44008-201ENSMUST00000204345 412 ntBASIC15.37■□□□□ 0.05
Col18a1P39061 Gm5738-201ENSMUST00000206016 779 ntBASIC15.37■□□□□ 0.05
Col18a1P39061 Gm7183-201ENSMUST00000213870 1005 ntBASIC15.37■□□□□ 0.05
Col18a1P39061 AC129217.1-201ENSMUST00000225181 642 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms