Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nckap1P28660 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nckap1P28660 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nckap1P28660 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
Nckap1P28660 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nckap1P28660 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nckap1P28660 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nckap1P28660 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nckap1P28660 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Nckap1P28660 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nckap1P28660 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.88□□□□□ -0.51
Nckap1P28660 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.88□□□□□ -0.51
Nckap1P28660 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.88□□□□□ -0.51
Nckap1P28660 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Nckap1P28660 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
Nckap1P28660 Gm5706-201ENSMUST00000181525 993 ntBASIC11.88□□□□□ -0.51
Nckap1P28660 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nckap1P28660 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nckap1P28660 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.88□□□□□ -0.51
Nckap1P28660 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Gm44126-201ENSMUST00000204831 514 ntBASIC11.88□□□□□ -0.51
Nckap1P28660 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.88□□□□□ -0.51
Nckap1P28660 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.88□□□□□ -0.51
Nckap1P28660 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.88□□□□□ -0.51
Nckap1P28660 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.88□□□□□ -0.51
Nckap1P28660 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Nckap1P28660 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nckap1P28660 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nckap1P28660 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nckap1P28660 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.88□□□□□ -0.51
Nckap1P28660 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.88□□□□□ -0.51
Nckap1P28660 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nckap1P28660 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.88□□□□□ -0.51
Nckap1P28660 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nckap1P28660 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nckap1P28660 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.87□□□□□ -0.51
Nckap1P28660 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.87□□□□□ -0.51
Nckap1P28660 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.87□□□□□ -0.51
Nckap1P28660 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Nckap1P28660 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nckap1P28660 Gm15566-201ENSMUST00000121130 590 ntBASIC11.87□□□□□ -0.51
Nckap1P28660 Gm17391-201ENSMUST00000171036 126 ntBASIC11.87□□□□□ -0.51
Nckap1P28660 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nckap1P28660 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.87□□□□□ -0.51
Nckap1P28660 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.87□□□□□ -0.51
Nckap1P28660 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.87□□□□□ -0.51
Nckap1P28660 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Nckap1P28660 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.87□□□□□ -0.51
Nckap1P28660 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nckap1P28660 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nckap1P28660 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms