Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.46□□□□□ -0.57
BdnfP21237 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.46□□□□□ -0.57
BdnfP21237 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.46□□□□□ -0.57
BdnfP21237 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.46□□□□□ -0.57
BdnfP21237 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.46□□□□□ -0.57
BdnfP21237 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
BdnfP21237 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
BdnfP21237 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
BdnfP21237 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
BdnfP21237 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
BdnfP21237 Gm40655-201ENSMUST00000220802 1880 ntTSL 5 BASIC11.46□□□□□ -0.58
BdnfP21237 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
BdnfP21237 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
BdnfP21237 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
BdnfP21237 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
BdnfP21237 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
BdnfP21237 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
BdnfP21237 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
BdnfP21237 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.45□□□□□ -0.58
BdnfP21237 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
BdnfP21237 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC11.45□□□□□ -0.58
BdnfP21237 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
BdnfP21237 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
BdnfP21237 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.45□□□□□ -0.58
BdnfP21237 Gm6023-201ENSMUST00000118217 606 ntBASIC11.45□□□□□ -0.58
BdnfP21237 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.45□□□□□ -0.58
BdnfP21237 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.45□□□□□ -0.58
BdnfP21237 Gm27514-201ENSMUST00000183692 110 ntBASIC11.45□□□□□ -0.58
BdnfP21237 Gm5370-201ENSMUST00000187187 574 ntBASIC11.45□□□□□ -0.58
BdnfP21237 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.45□□□□□ -0.58
BdnfP21237 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
BdnfP21237 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.45□□□□□ -0.58
BdnfP21237 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.45□□□□□ -0.58
BdnfP21237 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.45□□□□□ -0.58
BdnfP21237 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
BdnfP21237 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.45□□□□□ -0.58
BdnfP21237 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.45□□□□□ -0.58
BdnfP21237 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.45□□□□□ -0.58
BdnfP21237 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
BdnfP21237 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
BdnfP21237 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.45□□□□□ -0.58
BdnfP21237 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
BdnfP21237 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.44□□□□□ -0.58
BdnfP21237 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
BdnfP21237 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
BdnfP21237 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.44□□□□□ -0.58
BdnfP21237 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.44□□□□□ -0.58
BdnfP21237 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
BdnfP21237 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Gm12058-201ENSMUST00000118614 437 ntBASIC11.44□□□□□ -0.58
BdnfP21237 Gm4986-201ENSMUST00000119731 549 ntBASIC11.44□□□□□ -0.58
BdnfP21237 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.44□□□□□ -0.58
BdnfP21237 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms