Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RaraP11416 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RaraP11416 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RaraP11416 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RaraP11416 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RaraP11416 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.86□□□□□ -0.35
RaraP11416 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RaraP11416 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
RaraP11416 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.85□□□□□ -0.35
RaraP11416 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.85□□□□□ -0.35
RaraP11416 Gm23270-201ENSMUST00000104055 131 ntBASIC12.85□□□□□ -0.35
RaraP11416 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.85□□□□□ -0.35
RaraP11416 Mir7085-201ENSMUST00000184353 66 ntBASIC12.85□□□□□ -0.35
RaraP11416 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.85□□□□□ -0.35
RaraP11416 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.85□□□□□ -0.35
RaraP11416 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.85□□□□□ -0.35
RaraP11416 Gm10312-201ENSMUST00000078515 489 ntBASIC12.85□□□□□ -0.35
RaraP11416 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
RaraP11416 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RaraP11416 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RaraP11416 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.85□□□□□ -0.35
RaraP11416 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
RaraP11416 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RaraP11416 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
RaraP11416 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RaraP11416 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
RaraP11416 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
RaraP11416 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.84□□□□□ -0.35
RaraP11416 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.84□□□□□ -0.35
RaraP11416 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.84□□□□□ -0.35
RaraP11416 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.84□□□□□ -0.35
RaraP11416 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.84□□□□□ -0.35
RaraP11416 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.84□□□□□ -0.35
RaraP11416 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.84□□□□□ -0.35
RaraP11416 Gm9192-201ENSMUST00000183221 985 ntBASIC12.84□□□□□ -0.35
RaraP11416 Gm9230-201ENSMUST00000188228 532 ntBASIC12.84□□□□□ -0.35
RaraP11416 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.84□□□□□ -0.35
RaraP11416 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
RaraP11416 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RaraP11416 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RaraP11416 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RaraP11416 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RaraP11416 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
RaraP11416 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RaraP11416 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RaraP11416 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms