Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm6407-201ENSMUST00000176468 549 ntBASIC12.31□□□□□ -0.44
PrnpP04925 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PrnpP04925 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.31□□□□□ -0.44
PrnpP04925 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.31□□□□□ -0.44
PrnpP04925 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.31□□□□□ -0.44
PrnpP04925 Gm45120-201ENSMUST00000208880 408 ntBASIC12.31□□□□□ -0.44
PrnpP04925 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrnpP04925 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
PrnpP04925 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PrnpP04925 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.31□□□□□ -0.44
PrnpP04925 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.31□□□□□ -0.44
PrnpP04925 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.31□□□□□ -0.44
PrnpP04925 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.31□□□□□ -0.44
PrnpP04925 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrnpP04925 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
PrnpP04925 Gm25517-201ENSMUST00000083865 134 ntBASIC12.31□□□□□ -0.44
PrnpP04925 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.31□□□□□ -0.44
PrnpP04925 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PrnpP04925 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrnpP04925 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PrnpP04925 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
PrnpP04925 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PrnpP04925 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrnpP04925 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrnpP04925 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrnpP04925 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrnpP04925 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrnpP04925 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PrnpP04925 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.31□□□□□ -0.44
PrnpP04925 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.31□□□□□ -0.44
PrnpP04925 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.31□□□□□ -0.44
PrnpP04925 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrnpP04925 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
PrnpP04925 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PrnpP04925 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
PrnpP04925 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.3□□□□□ -0.44
PrnpP04925 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.3□□□□□ -0.44
PrnpP04925 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.3□□□□□ -0.44
PrnpP04925 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PrnpP04925 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.3□□□□□ -0.44
PrnpP04925 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Map1b-203ENSMUST00000223725 2669 ntBASIC12.3□□□□□ -0.44
PrnpP04925 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
PrnpP04925 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
PrnpP04925 Gm15744-201ENSMUST00000161734 213 ntBASIC12.3□□□□□ -0.44
PrnpP04925 Gm26134-201ENSMUST00000178484 110 ntBASIC12.3□□□□□ -0.44
PrnpP04925 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.3□□□□□ -0.44
PrnpP04925 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.3□□□□□ -0.44
PrnpP04925 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.3□□□□□ -0.44
PrnpP04925 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
PrnpP04925 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.3□□□□□ -0.44
PrnpP04925 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
PrnpP04925 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrnpP04925 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.29□□□□□ -0.44
PrnpP04925 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.29□□□□□ -0.44
PrnpP04925 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.29□□□□□ -0.44
PrnpP04925 Gm22877-201ENSMUST00000175451 105 ntBASIC12.29□□□□□ -0.44
PrnpP04925 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.29□□□□□ -0.44
PrnpP04925 Gm29410-201ENSMUST00000188383 694 ntBASIC12.29□□□□□ -0.44
PrnpP04925 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PrnpP04925 Gm23105-201ENSMUST00000083719 134 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms