Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Gm14028-201ENSMUST00000117434 479 ntBASIC10.83□□□□□ -0.68
Gm3543D3Z235 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Gm23119-201ENSMUST00000158610 140 ntBASIC10.83□□□□□ -0.68
Gm3543D3Z235 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Gm16505-201ENSMUST00000179981 232 ntBASIC10.83□□□□□ -0.68
Gm3543D3Z235 Rps4l-202ENSMUST00000204242 789 ntBASIC10.83□□□□□ -0.68
Gm3543D3Z235 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.83□□□□□ -0.68
Gm3543D3Z235 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Gm3543D3Z235 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Gm3543D3Z235 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm29615-201ENSMUST00000185371 697 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm28224-201ENSMUST00000186078 697 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm29001-201ENSMUST00000186177 697 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm28292-201ENSMUST00000186593 697 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm28101-201ENSMUST00000187608 697 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm29076-201ENSMUST00000187689 697 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm28302-201ENSMUST00000187931 697 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm28646-201ENSMUST00000188220 697 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm28205-201ENSMUST00000189177 697 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm29032-201ENSMUST00000189797 697 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm28695-201ENSMUST00000190300 697 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm37448-201ENSMUST00000192795 697 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm17812-201ENSMUST00000204935 318 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm8913-201ENSMUST00000209491 641 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm3543D3Z235 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.82□□□□□ -0.68
Gm3543D3Z235 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms