Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Gm12428-201ENSMUST00000119844 727 ntBASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Gm12036-201ENSMUST00000120008 530 ntBASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Gm11400-201ENSMUST00000120853 1214 ntBASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Gm7820-201ENSMUST00000121012 1052 ntBASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Gm11978-201ENSMUST00000122315 466 ntBASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Gm46209-201ENSMUST00000217912 553 ntBASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Psmb5-202ENSMUST00000227257 622 ntBASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Mir339-201ENSMUST00000083659 96 ntBASIC9.5□□□□□ -0.89
Smco4Q9JIS3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Gm43372-201ENSMUST00000202662 3016 ntBASIC9.5□□□□□ -0.89
Smco4Q9JIS3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Gm43002-201ENSMUST00000200310 155 ntBASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Gm5161-201ENSMUST00000075243 853 ntBASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco4Q9JIS3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco4Q9JIS3 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms