Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chaf1bQ9D0N7 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.19□□□□□ -0.62
Chaf1bQ9D0N7 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chaf1bQ9D0N7 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chaf1bQ9D0N7 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Gm37057-201ENSMUST00000192624 1916 ntBASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Gm8738-201ENSMUST00000172606 329 ntBASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chaf1bQ9D0N7 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Gm6091-201ENSMUST00000098307 165 ntBASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms