Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retreg3Q9CQV4 Gm21064-201ENSMUST00000189723 1375 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retreg3Q9CQV4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retreg3Q9CQV4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retreg3Q9CQV4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Gm13460-201ENSMUST00000121274 353 ntBASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Mir3473a-201ENSMUST00000175011 78 ntBASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Gm26238-201ENSMUST00000175538 117 ntBASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Gm37724-201ENSMUST00000195240 1221 ntBASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Gm8712-201ENSMUST00000221090 701 ntBASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Gm18026-201ENSMUST00000222789 727 ntBASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retreg3Q9CQV4 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Gm15279-201ENSMUST00000155593 288 ntBASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Gm37858-201ENSMUST00000192759 1231 ntBASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Gm18985-201ENSMUST00000196472 1079 ntBASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Gm45845-201ENSMUST00000207326 582 ntBASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Gm18996-201ENSMUST00000214851 755 ntBASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Gm18043-201ENSMUST00000216741 739 ntBASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Retreg3Q9CQV4 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms