Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Gm4034-201ENSMUST00000187674 480 ntBASIC11.94□□□□□ -0.5
Trim33Q99PP7 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim33Q99PP7 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.94□□□□□ -0.5
Trim33Q99PP7 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.94□□□□□ -0.5
Trim33Q99PP7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.94□□□□□ -0.5
Trim33Q99PP7 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim33Q99PP7 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Gm38247-201ENSMUST00000194675 433 ntBASIC11.93□□□□□ -0.5
Trim33Q99PP7 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim33Q99PP7 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.93□□□□□ -0.5
Trim33Q99PP7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim33Q99PP7 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim33Q99PP7 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.92□□□□□ -0.5
Trim33Q99PP7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.92□□□□□ -0.5
Trim33Q99PP7 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Gm12015-201ENSMUST00000117065 843 ntBASIC11.92□□□□□ -0.5
Trim33Q99PP7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim33Q99PP7 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.92□□□□□ -0.5
Trim33Q99PP7 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms