Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm6423-201ENSMUST00000204315 934 ntBASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Gm7238-201ENSMUST00000206467 973 ntBASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Gm18256-201ENSMUST00000209087 907 ntBASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Gm13117-201ENSMUST00000120894 691 ntBASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Gm24078-201ENSMUST00000158184 103 ntBASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Gm8343-201ENSMUST00000182705 994 ntBASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Gm9204-201ENSMUST00000212641 947 ntBASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Gm19994-201ENSMUST00000217086 586 ntBASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col25a1Q99MQ5 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Gm13192-201ENSMUST00000101199 208 ntBASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Gm10443-201ENSMUST00000119024 210 ntBASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Gm13263-201ENSMUST00000121271 838 ntBASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.4□□□□□ -0.42
Col25a1Q99MQ5 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms