Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Gm45224-201ENSMUST00000208203 414 ntBASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Gm8959-201ENSMUST00000213150 571 ntBASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Tlr3Q99MB1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Gm11331-201ENSMUST00000119764 288 ntBASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Gm22334-201ENSMUST00000158070 133 ntBASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Gm8956-201ENSMUST00000203939 825 ntBASIC12.81□□□□□ -0.36
Tlr3Q99MB1 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tlr3Q99MB1 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.8□□□□□ -0.36
Tlr3Q99MB1 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tlr3Q99MB1 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms