Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Gm24830-201ENSMUST00000102024 166 ntBASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Gm45865-201ENSMUST00000211815 945 ntBASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Cts7-204ENSMUST00000225321 1257 ntBASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Gm26232-201ENSMUST00000083360 166 ntBASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Gm13350-201ENSMUST00000120519 479 ntBASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Gm15547-201ENSMUST00000122152 333 ntBASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Gm10312-201ENSMUST00000078515 489 ntBASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Chmp1b1Q99LU0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms