Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10□□□□□ -0.81
H1fooQ8VIK3 Gm6334-201ENSMUST00000207083 228 ntBASIC10□□□□□ -0.81
H1fooQ8VIK3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10□□□□□ -0.81
H1fooQ8VIK3 AC154252.2-201ENSMUST00000223593 767 ntBASIC10□□□□□ -0.81
H1fooQ8VIK3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10□□□□□ -0.81
H1fooQ8VIK3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10□□□□□ -0.81
H1fooQ8VIK3 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10□□□□□ -0.81
H1fooQ8VIK3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
H1fooQ8VIK3 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10□□□□□ -0.81
H1fooQ8VIK3 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
H1fooQ8VIK3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Gm7722-201ENSMUST00000120646 741 ntBASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Gm27516-201ENSMUST00000184237 98 ntBASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Gm9230-201ENSMUST00000188228 532 ntBASIC9.99□□□□□ -0.81
H1fooQ8VIK3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Gm44974-201ENSMUST00000206387 1279 ntBASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC9.99□□□□□ -0.81
H1fooQ8VIK3 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
H1fooQ8VIK3 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
H1fooQ8VIK3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Gm11989-201ENSMUST00000117240 672 ntBASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Gm11362-201ENSMUST00000118838 850 ntBASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Gm14726-201ENSMUST00000120623 896 ntBASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
H1fooQ8VIK3 Gm5706-201ENSMUST00000181525 993 ntBASIC9.98□□□□□ -0.81
H1fooQ8VIK3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms