Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TraipQ8VIG6 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Gm15352-201ENSMUST00000118696 270 ntBASIC12.8□□□□□ -0.36
TraipQ8VIG6 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.8□□□□□ -0.36
TraipQ8VIG6 Gm10051-201ENSMUST00000145209 414 ntBASIC12.8□□□□□ -0.36
TraipQ8VIG6 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Mir6546-201ENSMUST00000184460 62 ntBASIC12.8□□□□□ -0.36
TraipQ8VIG6 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Gm45550-201ENSMUST00000209380 946 ntBASIC12.8□□□□□ -0.36
TraipQ8VIG6 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.8□□□□□ -0.36
TraipQ8VIG6 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Gm18363-201ENSMUST00000221671 730 ntBASIC12.8□□□□□ -0.36
TraipQ8VIG6 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TraipQ8VIG6 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.8□□□□□ -0.36
TraipQ8VIG6 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.8□□□□□ -0.36
TraipQ8VIG6 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TraipQ8VIG6 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
TraipQ8VIG6 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.79□□□□□ -0.36
TraipQ8VIG6 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Gm37893-201ENSMUST00000192826 2437 ntBASIC12.79□□□□□ -0.36
TraipQ8VIG6 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Gm22920-201ENSMUST00000102175 109 ntBASIC12.79□□□□□ -0.36
TraipQ8VIG6 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.79□□□□□ -0.36
TraipQ8VIG6 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.79□□□□□ -0.36
TraipQ8VIG6 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.79□□□□□ -0.36
TraipQ8VIG6 Gm5051-201ENSMUST00000204085 485 ntBASIC12.79□□□□□ -0.36
TraipQ8VIG6 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.79□□□□□ -0.36
TraipQ8VIG6 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.79□□□□□ -0.36
TraipQ8VIG6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.79□□□□□ -0.36
TraipQ8VIG6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Gm42995-201ENSMUST00000197047 1330 ntBASIC12.79□□□□□ -0.36
TraipQ8VIG6 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.79□□□□□ -0.36
TraipQ8VIG6 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TraipQ8VIG6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms