Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.33□□□□□ -0.44
Trim60Q8VI40 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Gm5419-201ENSMUST00000119301 527 ntBASIC12.32□□□□□ -0.44
Trim60Q8VI40 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Mir1938-201ENSMUST00000158746 100 ntBASIC12.32□□□□□ -0.44
Trim60Q8VI40 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.32□□□□□ -0.44
Trim60Q8VI40 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim60Q8VI40 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim60Q8VI40 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Gm22018-201ENSMUST00000104357 131 ntBASIC12.31□□□□□ -0.44
Trim60Q8VI40 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.31□□□□□ -0.44
Trim60Q8VI40 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.31□□□□□ -0.44
Trim60Q8VI40 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim60Q8VI40 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim60Q8VI40 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.3□□□□□ -0.44
Trim60Q8VI40 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 123.4 ms