Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh18Q8VHR0 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Gm4984-201ENSMUST00000115987 360 ntBASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Gm1335-201ENSMUST00000121653 386 ntBASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Gm38092-201ENSMUST00000195600 653 ntBASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 AC121870.2-201ENSMUST00000214343 1870 ntBASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh18Q8VHR0 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Gm13492-201ENSMUST00000119772 665 ntBASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Gm16177-201ENSMUST00000120728 718 ntBASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Gm14760-201ENSMUST00000121831 999 ntBASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Rmrp-201ENSMUST00000157463 271 ntBASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms