Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Gm14270-201ENSMUST00000118388 846 ntBASIC13.46□□□□□ -0.25
Syne4Q8CII8 Gm12948-201ENSMUST00000119406 682 ntBASIC13.46□□□□□ -0.25
Syne4Q8CII8 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Gm8723-201ENSMUST00000166076 820 ntBASIC13.46□□□□□ -0.25
Syne4Q8CII8 Gm8701-201ENSMUST00000169259 874 ntBASIC13.46□□□□□ -0.25
Syne4Q8CII8 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Gm18460-201ENSMUST00000208088 464 ntBASIC13.46□□□□□ -0.25
Syne4Q8CII8 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.46□□□□□ -0.25
Syne4Q8CII8 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Syne4Q8CII8 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Syne4Q8CII8 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Syne4Q8CII8 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Syne4Q8CII8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Syne4Q8CII8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Syne4Q8CII8 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Syne4Q8CII8 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Syne4Q8CII8 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Syne4Q8CII8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Syne4Q8CII8 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.45□□□□□ -0.26
Syne4Q8CII8 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Gm22146-201ENSMUST00000157397 288 ntBASIC13.45□□□□□ -0.26
Syne4Q8CII8 Gm10807-201ENSMUST00000177134 795 ntBASIC13.45□□□□□ -0.26
Syne4Q8CII8 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC13.45□□□□□ -0.26
Syne4Q8CII8 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.45□□□□□ -0.26
Syne4Q8CII8 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Gm18204-201ENSMUST00000209835 793 ntBASIC13.45□□□□□ -0.26
Syne4Q8CII8 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Gm19640-201ENSMUST00000214849 464 ntBASIC13.45□□□□□ -0.26
Syne4Q8CII8 Gm16380-201ENSMUST00000077997 478 ntBASIC13.45□□□□□ -0.26
Syne4Q8CII8 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Syne4Q8CII8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Gm24791-201ENSMUST00000104284 131 ntBASIC13.44□□□□□ -0.26
Syne4Q8CII8 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Gm13351-201ENSMUST00000118087 414 ntBASIC13.44□□□□□ -0.26
Syne4Q8CII8 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Gm7741-201ENSMUST00000181445 989 ntBASIC13.44□□□□□ -0.26
Syne4Q8CII8 Gm26989-201ENSMUST00000182608 749 ntBASIC13.44□□□□□ -0.26
Syne4Q8CII8 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Gm44552-201ENSMUST00000205458 1247 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms