Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.91□□□□□ -0.18
Vps53Q8CCB4 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Gm12015-201ENSMUST00000117065 843 ntBASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Gm4034-201ENSMUST00000187674 480 ntBASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Gm37835-201ENSMUST00000193305 361 ntBASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Gm17812-201ENSMUST00000204935 318 ntBASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Gm14832-201ENSMUST00000121289 322 ntBASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Mir7032-201ENSMUST00000185154 79 ntBASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vps53Q8CCB4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Gm9062-201ENSMUST00000117712 727 ntBASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Gm15782-201ENSMUST00000121073 445 ntBASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms