Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Gm11700-201ENSMUST00000119409 403 ntBASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Gm37201-201ENSMUST00000191845 523 ntBASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Lysmd4Q8CC84 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Gm12164-201ENSMUST00000121695 551 ntBASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Gm29127-201ENSMUST00000188304 517 ntBASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lysmd4Q8CC84 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms