Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm14193-201ENSMUST00000105067 153 ntBASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Gm8731-201ENSMUST00000118088 412 ntBASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Gm15352-201ENSMUST00000118696 270 ntBASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Gm5706-201ENSMUST00000181525 993 ntBASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Gm29499-201ENSMUST00000189151 486 ntBASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Gm28329-201ENSMUST00000191208 689 ntBASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Gm29171-201ENSMUST00000191397 486 ntBASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Gm34023-201ENSMUST00000195539 217 ntBASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Gm11628-201ENSMUST00000117568 171 ntBASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.63□□□□□ -0.39
Rd3Q8BRE0 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Gm9358-201ENSMUST00000183067 927 ntBASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Gm43058-201ENSMUST00000197645 625 ntBASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Gm10752-201ENSMUST00000218348 729 ntBASIC12.63□□□□□ -0.39
Rd3Q8BRE0 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rd3Q8BRE0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Gm22920-201ENSMUST00000102175 109 ntBASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Gm1848-201ENSMUST00000120711 789 ntBASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Gm23045-201ENSMUST00000175041 96 ntBASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Gm4654-201ENSMUST00000183305 982 ntBASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Gm28324-201ENSMUST00000187913 264 ntBASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Gm37299-201ENSMUST00000193951 826 ntBASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Gm5714-201ENSMUST00000197343 566 ntBASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Gm17931-201ENSMUST00000208132 634 ntBASIC12.62□□□□□ -0.39
Rd3Q8BRE0 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rd3Q8BRE0 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms