Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.42□□□□□ -0.58
Vrk1Q80X41 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Vrk1Q80X41 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Gm14247-201ENSMUST00000120950 237 ntBASIC11.42□□□□□ -0.58
Vrk1Q80X41 Gm11660-201ENSMUST00000120955 412 ntBASIC11.42□□□□□ -0.58
Vrk1Q80X41 Gm22144-201ENSMUST00000157402 102 ntBASIC11.42□□□□□ -0.58
Vrk1Q80X41 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Gm8365-201ENSMUST00000197334 648 ntBASIC11.42□□□□□ -0.58
Vrk1Q80X41 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Gm17831-201ENSMUST00000205579 900 ntBASIC11.42□□□□□ -0.58
Vrk1Q80X41 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.42□□□□□ -0.58
Vrk1Q80X41 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.42□□□□□ -0.58
Vrk1Q80X41 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Vrk1Q80X41 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.42□□□□□ -0.58
Vrk1Q80X41 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vrk1Q80X41 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.41□□□□□ -0.58
Vrk1Q80X41 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.41□□□□□ -0.58
Vrk1Q80X41 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.41□□□□□ -0.58
Vrk1Q80X41 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Gm5419-201ENSMUST00000119301 527 ntBASIC11.41□□□□□ -0.58
Vrk1Q80X41 Gm11956-201ENSMUST00000119525 512 ntBASIC11.41□□□□□ -0.58
Vrk1Q80X41 Gm13263-201ENSMUST00000121271 838 ntBASIC11.41□□□□□ -0.58
Vrk1Q80X41 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Gm4726-201ENSMUST00000135604 736 ntBASIC11.41□□□□□ -0.58
Vrk1Q80X41 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Gm6019-201ENSMUST00000148369 736 ntBASIC11.41□□□□□ -0.58
Vrk1Q80X41 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vrk1Q80X41 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.41□□□□□ -0.58
Vrk1Q80X41 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Gm9540-201ENSMUST00000188230 478 ntBASIC11.41□□□□□ -0.58
Vrk1Q80X41 Gm45575-201ENSMUST00000210283 548 ntBASIC11.41□□□□□ -0.58
Vrk1Q80X41 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.41□□□□□ -0.58
Vrk1Q80X41 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.41□□□□□ -0.58
Vrk1Q80X41 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.41□□□□□ -0.58
Vrk1Q80X41 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Vrk1Q80X41 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms