Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 AC154186.1-201ENSMUST00000227711 1597 ntBASIC11.14□□□□□ -0.63
Pif1Q80SX8 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.14□□□□□ -0.63
Pif1Q80SX8 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pif1Q80SX8 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Gm12857-201ENSMUST00000117678 592 ntBASIC11.13□□□□□ -0.63
Pif1Q80SX8 Gm8566-201ENSMUST00000120174 465 ntBASIC11.13□□□□□ -0.63
Pif1Q80SX8 Gm7722-201ENSMUST00000120646 741 ntBASIC11.13□□□□□ -0.63
Pif1Q80SX8 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Gm17391-201ENSMUST00000171036 126 ntBASIC11.13□□□□□ -0.63
Pif1Q80SX8 Gm25025-201ENSMUST00000175018 111 ntBASIC11.13□□□□□ -0.63
Pif1Q80SX8 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.13□□□□□ -0.63
Pif1Q80SX8 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Pif1Q80SX8 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Gm10288-201ENSMUST00000084614 537 ntBASIC11.13□□□□□ -0.63
Pif1Q80SX8 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pif1Q80SX8 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.12□□□□□ -0.63
Pif1Q80SX8 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Rprl1-201ENSMUST00000158050 327 ntBASIC11.12□□□□□ -0.63
Pif1Q80SX8 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Ap1g1-206ENSMUST00000179104 1096 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 863.7 ms