Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Gm15236-201ENSMUST00000117309 379 ntBASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Gm18056-201ENSMUST00000207670 568 ntBASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Gm18061-201ENSMUST00000208350 562 ntBASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Gm18063-201ENSMUST00000208529 568 ntBASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Gm18052-201ENSMUST00000208750 559 ntBASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Gm2553-201ENSMUST00000215986 605 ntBASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Exosc3Q7TQK4 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Gm11509-201ENSMUST00000117358 325 ntBASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Gm11439-201ENSMUST00000118598 409 ntBASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Exosc3Q7TQK4 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms