Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.08□□□□□ -0.96
NipblQ6KCD5 Gm12407-201ENSMUST00000180219 324 ntBASIC9.08□□□□□ -0.96
NipblQ6KCD5 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Gm45410-201ENSMUST00000211331 1093 ntBASIC9.08□□□□□ -0.96
NipblQ6KCD5 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.08□□□□□ -0.96
NipblQ6KCD5 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Gm23272-201ENSMUST00000104053 129 ntBASIC9.08□□□□□ -0.96
NipblQ6KCD5 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Gm12579-201ENSMUST00000118040 783 ntBASIC9.08□□□□□ -0.96
NipblQ6KCD5 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Gm7815-201ENSMUST00000196104 832 ntBASIC9.08□□□□□ -0.96
NipblQ6KCD5 Gm43726-201ENSMUST00000199110 775 ntBASIC9.08□□□□□ -0.96
NipblQ6KCD5 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Gm17541-201ENSMUST00000080062 525 ntBASIC9.08□□□□□ -0.96
NipblQ6KCD5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Gm8968-201ENSMUST00000199133 1303 ntBASIC9.08□□□□□ -0.96
NipblQ6KCD5 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
NipblQ6KCD5 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Gm12961-201ENSMUST00000120507 1050 ntBASIC9.07□□□□□ -0.96
NipblQ6KCD5 Gm11244-201ENSMUST00000121243 237 ntBASIC9.07□□□□□ -0.96
NipblQ6KCD5 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.07□□□□□ -0.96
NipblQ6KCD5 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC9.07□□□□□ -0.96
NipblQ6KCD5 CT009536.2-201ENSMUST00000225370 665 ntBASIC9.07□□□□□ -0.96
NipblQ6KCD5 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Gm44260-201ENSMUST00000204946 2094 ntBASIC9.07□□□□□ -0.96
NipblQ6KCD5 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC9.07□□□□□ -0.96
NipblQ6KCD5 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC9.07□□□□□ -0.96
NipblQ6KCD5 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Gm37782-201ENSMUST00000194879 678 ntBASIC9.07□□□□□ -0.96
NipblQ6KCD5 Gm18466-201ENSMUST00000209147 499 ntBASIC9.07□□□□□ -0.96
NipblQ6KCD5 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.07□□□□□ -0.96
NipblQ6KCD5 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
NipblQ6KCD5 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms