Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Sdc3Q64519 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.52□□□□□ -0.57
Sdc3Q64519 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.52□□□□□ -0.57
Sdc3Q64519 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.52□□□□□ -0.57
Sdc3Q64519 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.52□□□□□ -0.57
Sdc3Q64519 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.52□□□□□ -0.57
Sdc3Q64519 Rprl1-201ENSMUST00000158050 327 ntBASIC11.52□□□□□ -0.57
Sdc3Q64519 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.52□□□□□ -0.57
Sdc3Q64519 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sdc3Q64519 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Sdc3Q64519 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.52□□□□□ -0.57
Sdc3Q64519 Gm18730-201ENSMUST00000218038 343 ntBASIC11.52□□□□□ -0.57
Sdc3Q64519 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.52□□□□□ -0.57
Sdc3Q64519 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.52□□□□□ -0.57
Sdc3Q64519 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sdc3Q64519 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.52□□□□□ -0.57
Sdc3Q64519 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sdc3Q64519 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.52□□□□□ -0.57
Sdc3Q64519 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.52□□□□□ -0.57
Sdc3Q64519 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.52□□□□□ -0.57
Sdc3Q64519 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Sdc3Q64519 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sdc3Q64519 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.52□□□□□ -0.57
Sdc3Q64519 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sdc3Q64519 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sdc3Q64519 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.51□□□□□ -0.57
Sdc3Q64519 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sdc3Q64519 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Sdc3Q64519 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sdc3Q64519 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Sdc3Q64519 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sdc3Q64519 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Gm4909-201ENSMUST00000118749 794 ntBASIC11.51□□□□□ -0.57
Sdc3Q64519 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Gm25732-201ENSMUST00000175168 60 ntBASIC11.51□□□□□ -0.57
Sdc3Q64519 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.51□□□□□ -0.57
Sdc3Q64519 Gm27552-201ENSMUST00000183351 62 ntBASIC11.51□□□□□ -0.57
Sdc3Q64519 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Gm27844-201ENSMUST00000183613 62 ntBASIC11.51□□□□□ -0.57
Sdc3Q64519 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.51□□□□□ -0.57
Sdc3Q64519 Gm43962-201ENSMUST00000203898 190 ntBASIC11.51□□□□□ -0.57
Sdc3Q64519 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.51□□□□□ -0.57
Sdc3Q64519 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.51□□□□□ -0.57
Sdc3Q64519 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.51□□□□□ -0.57
Sdc3Q64519 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.51□□□□□ -0.57
Sdc3Q64519 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sdc3Q64519 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sdc3Q64519 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sdc3Q64519 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sdc3Q64519 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sdc3Q64519 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sdc3Q64519 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms