Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Gm43179-201ENSMUST00000198797 275 ntBASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Gm45331-201ENSMUST00000209868 554 ntBASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
BC051142Q3V0M8 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Gm44364-201ENSMUST00000198368 141 ntBASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Gm4607-201ENSMUST00000206649 577 ntBASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Gm19187-201ENSMUST00000206781 892 ntBASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Gm45598-202ENSMUST00000210719 986 ntBASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
BC051142Q3V0M8 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Gm7584-201ENSMUST00000175829 940 ntBASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.71□□□□□ -0.37
BC051142Q3V0M8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.71□□□□□ -0.37
BC051142Q3V0M8 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms