Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim43bP86448 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim43bP86448 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Trim43bP86448 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.29□□□□□ -0.44
Trim43bP86448 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.29□□□□□ -0.44
Trim43bP86448 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim43bP86448 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim43bP86448 Gm27243-201ENSMUST00000183964 521 ntBASIC12.29□□□□□ -0.44
Trim43bP86448 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim43bP86448 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.29□□□□□ -0.44
Trim43bP86448 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim43bP86448 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim43bP86448 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim43bP86448 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim43bP86448 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.29□□□□□ -0.44
Trim43bP86448 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim43bP86448 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43bP86448 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim43bP86448 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim43bP86448 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.28□□□□□ -0.44
Trim43bP86448 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trim43bP86448 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.28□□□□□ -0.44
Trim43bP86448 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim43bP86448 Mir877-201ENSMUST00000104738 85 ntBASIC12.28□□□□□ -0.44
Trim43bP86448 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim43bP86448 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
Trim43bP86448 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.28□□□□□ -0.44
Trim43bP86448 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim43bP86448 Gm31256-201ENSMUST00000194705 506 ntBASIC12.28□□□□□ -0.44
Trim43bP86448 Gm44405-201ENSMUST00000198952 126 ntBASIC12.28□□□□□ -0.44
Trim43bP86448 Gm30285-201ENSMUST00000214614 422 ntBASIC12.28□□□□□ -0.44
Trim43bP86448 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim43bP86448 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.28□□□□□ -0.44
Trim43bP86448 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim43bP86448 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim43bP86448 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Trim43bP86448 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim43bP86448 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim43bP86448 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim43bP86448 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim43bP86448 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43bP86448 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.27□□□□□ -0.44
Trim43bP86448 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.27□□□□□ -0.44
Trim43bP86448 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.27□□□□□ -0.44
Trim43bP86448 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43bP86448 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43bP86448 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Trim43bP86448 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43bP86448 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.27□□□□□ -0.44
Trim43bP86448 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms