Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shox2P70390 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.76□□□□□ -0.53
Shox2P70390 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Shox2P70390 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Shox2P70390 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Shox2P70390 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.75□□□□□ -0.53
Shox2P70390 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.75□□□□□ -0.53
Shox2P70390 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.75□□□□□ -0.53
Shox2P70390 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Shox2P70390 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Shox2P70390 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.75□□□□□ -0.53
Shox2P70390 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.75□□□□□ -0.53
Shox2P70390 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Shox2P70390 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Shox2P70390 Gm8463-201ENSMUST00000208573 613 ntBASIC11.75□□□□□ -0.53
Shox2P70390 Gm39404-201ENSMUST00000216350 313 ntBASIC11.75□□□□□ -0.53
Shox2P70390 Gm45930-201ENSMUST00000221330 292 ntBASIC11.75□□□□□ -0.53
Shox2P70390 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.75□□□□□ -0.53
Shox2P70390 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Shox2P70390 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Shox2P70390 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.75□□□□□ -0.53
Shox2P70390 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Shox2P70390 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shox2P70390 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.75□□□□□ -0.53
Shox2P70390 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.74□□□□□ -0.53
Shox2P70390 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.74□□□□□ -0.53
Shox2P70390 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Shox2P70390 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Shox2P70390 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Shox2P70390 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.74□□□□□ -0.53
Shox2P70390 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.74□□□□□ -0.53
Shox2P70390 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Shox2P70390 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Shox2P70390 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.74□□□□□ -0.53
Shox2P70390 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Shox2P70390 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Shox2P70390 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Gm6114-201ENSMUST00000182472 968 ntBASIC11.74□□□□□ -0.53
Shox2P70390 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.74□□□□□ -0.53
Shox2P70390 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.74□□□□□ -0.53
Shox2P70390 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.74□□□□□ -0.53
Shox2P70390 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Gm10076-201ENSMUST00000073238 384 ntBASIC11.74□□□□□ -0.53
Shox2P70390 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.74□□□□□ -0.53
Shox2P70390 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Shox2P70390 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Shox2P70390 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shox2P70390 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Shox2P70390 Gm24934-201ENSMUST00000103764 111 ntBASIC11.73□□□□□ -0.53
Shox2P70390 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms