Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Smad1P70340 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.32□□□□□ -0.44
Smad1P70340 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Smad1P70340 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Gm25214-201ENSMUST00000104573 129 ntBASIC12.32□□□□□ -0.44
Smad1P70340 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Smad1P70340 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.32□□□□□ -0.44
Smad1P70340 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.32□□□□□ -0.44
Smad1P70340 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Gm2546-201ENSMUST00000182630 991 ntBASIC12.32□□□□□ -0.44
Smad1P70340 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.32□□□□□ -0.44
Smad1P70340 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.32□□□□□ -0.44
Smad1P70340 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Smad1P70340 Gm10076-201ENSMUST00000073238 384 ntBASIC12.32□□□□□ -0.44
Smad1P70340 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.32□□□□□ -0.44
Smad1P70340 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smad1P70340 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smad1P70340 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.32□□□□□ -0.44
Smad1P70340 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smad1P70340 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Smad1P70340 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Smad1P70340 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.31□□□□□ -0.44
Smad1P70340 Gm11331-201ENSMUST00000119764 288 ntBASIC12.31□□□□□ -0.44
Smad1P70340 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Smad1P70340 Gm23119-201ENSMUST00000158610 140 ntBASIC12.31□□□□□ -0.44
Smad1P70340 Gm26361-201ENSMUST00000158868 186 ntBASIC12.31□□□□□ -0.44
Smad1P70340 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.31□□□□□ -0.44
Smad1P70340 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.31□□□□□ -0.44
Smad1P70340 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.31□□□□□ -0.44
Smad1P70340 Gm8885-201ENSMUST00000189382 598 ntBASIC12.31□□□□□ -0.44
Smad1P70340 Gm44882-201ENSMUST00000205702 802 ntBASIC12.31□□□□□ -0.44
Smad1P70340 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.31□□□□□ -0.44
Smad1P70340 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.31□□□□□ -0.44
Smad1P70340 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Smad1P70340 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.31□□□□□ -0.44
Smad1P70340 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smad1P70340 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smad1P70340 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smad1P70340 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Smad1P70340 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.3□□□□□ -0.44
Smad1P70340 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smad1P70340 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smad1P70340 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smad1P70340 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.3□□□□□ -0.44
Smad1P70340 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.3□□□□□ -0.44
Smad1P70340 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smad1P70340 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smad1P70340 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms