Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.23□□□□□ -0.45
Ybx1P62960 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.23□□□□□ -0.45
Ybx1P62960 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ybx1P62960 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ybx1P62960 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.23□□□□□ -0.45
Ybx1P62960 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.23□□□□□ -0.45
Ybx1P62960 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ybx1P62960 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.22□□□□□ -0.45
Ybx1P62960 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ybx1P62960 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ybx1P62960 Gm13937-201ENSMUST00000121000 988 ntBASIC12.22□□□□□ -0.45
Ybx1P62960 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Gm5706-201ENSMUST00000181525 993 ntBASIC12.22□□□□□ -0.45
Ybx1P62960 Gm4034-201ENSMUST00000187674 480 ntBASIC12.22□□□□□ -0.45
Ybx1P62960 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.22□□□□□ -0.45
Ybx1P62960 Gm42657-201ENSMUST00000201746 211 ntBASIC12.22□□□□□ -0.45
Ybx1P62960 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.22□□□□□ -0.45
Ybx1P62960 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.22□□□□□ -0.45
Ybx1P62960 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.22□□□□□ -0.45
Ybx1P62960 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ybx1P62960 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.22□□□□□ -0.45
Ybx1P62960 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Ybx1P62960 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ybx1P62960 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ybx1P62960 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Ybx1P62960 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ybx1P62960 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ybx1P62960 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ybx1P62960 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ybx1P62960 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ybx1P62960 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ybx1P62960 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Ybx1P62960 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.21□□□□□ -0.45
Ybx1P62960 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ybx1P62960 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ybx1P62960 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ybx1P62960 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ybx1P62960 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Ybx1P62960 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ybx1P62960 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ybx1P62960 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ybx1P62960 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ybx1P62960 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ybx1P62960 Gm22711-201ENSMUST00000116890 133 ntBASIC12.21□□□□□ -0.45
Ybx1P62960 Gm8737-201ENSMUST00000122208 642 ntBASIC12.21□□□□□ -0.45
Ybx1P62960 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ybx1P62960 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ybx1P62960 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.21□□□□□ -0.45
Ybx1P62960 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.21□□□□□ -0.45
Ybx1P62960 Gm29499-201ENSMUST00000189151 486 ntBASIC12.21□□□□□ -0.45
Ybx1P62960 Gm28329-201ENSMUST00000191208 689 ntBASIC12.21□□□□□ -0.45
Ybx1P62960 Gm29171-201ENSMUST00000191397 486 ntBASIC12.21□□□□□ -0.45
Ybx1P62960 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.21□□□□□ -0.45
Ybx1P62960 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.21□□□□□ -0.45
Ybx1P62960 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.21□□□□□ -0.45
Ybx1P62960 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.21□□□□□ -0.45
Ybx1P62960 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ybx1P62960 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ybx1P62960 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms