Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Lsm6P62313 Gm14441-201ENSMUST00000121960 540 ntBASIC10.49□□□□□ -0.73
Lsm6P62313 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Lsm6P62313 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.49□□□□□ -0.73
Lsm6P62313 Gm44651-201ENSMUST00000207343 372 ntBASIC10.49□□□□□ -0.73
Lsm6P62313 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.49□□□□□ -0.73
Lsm6P62313 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Lsm6P62313 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.49□□□□□ -0.73
Lsm6P62313 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Lsm6P62313 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Lsm6P62313 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Lsm6P62313 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Lsm6P62313 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Lsm6P62313 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Lsm6P62313 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.49□□□□□ -0.73
Lsm6P62313 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Lsm6P62313 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Lsm6P62313 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Lsm6P62313 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Lsm6P62313 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Lsm6P62313 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Lsm6P62313 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Lsm6P62313 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Lsm6P62313 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Lsm6P62313 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.48□□□□□ -0.73
Lsm6P62313 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Lsm6P62313 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Lsm6P62313 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Lsm6P62313 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Lsm6P62313 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.48□□□□□ -0.73
Lsm6P62313 Gm15276-201ENSMUST00000145953 498 ntBASIC10.48□□□□□ -0.73
Lsm6P62313 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.48□□□□□ -0.73
Lsm6P62313 Gm20482-202ENSMUST00000174729 825 ntBASIC10.48□□□□□ -0.73
Lsm6P62313 Gm6114-201ENSMUST00000182472 968 ntBASIC10.48□□□□□ -0.73
Lsm6P62313 Gm8956-201ENSMUST00000203939 825 ntBASIC10.48□□□□□ -0.73
Lsm6P62313 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Lsm6P62313 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.48□□□□□ -0.73
Lsm6P62313 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.48□□□□□ -0.73
Lsm6P62313 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.48□□□□□ -0.73
Lsm6P62313 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.48□□□□□ -0.73
Lsm6P62313 Gm5455-201ENSMUST00000058710 715 ntBASIC10.48□□□□□ -0.73
Lsm6P62313 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.48□□□□□ -0.73
Lsm6P62313 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Lsm6P62313 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.48□□□□□ -0.73
Lsm6P62313 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Lsm6P62313 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.48□□□□□ -0.73
Lsm6P62313 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Lsm6P62313 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm6P62313 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Lsm6P62313 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.47□□□□□ -0.73
Lsm6P62313 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Lsm6P62313 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Lsm6P62313 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.47□□□□□ -0.73
Lsm6P62313 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.47□□□□□ -0.73
Lsm6P62313 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.47□□□□□ -0.73
Lsm6P62313 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Lsm6P62313 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Mir1938-201ENSMUST00000158746 100 ntBASIC10.47□□□□□ -0.73
Lsm6P62313 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Lsm6P62313 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm6P62313 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms