Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Sssca1P56873 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Sssca1P56873 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Sssca1P56873 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Gm3890-201ENSMUST00000182416 207 ntBASIC9.62□□□□□ -0.87
Sssca1P56873 Gm9136-201ENSMUST00000193368 454 ntBASIC9.62□□□□□ -0.87
Sssca1P56873 Gm42937-201ENSMUST00000197360 752 ntBASIC9.62□□□□□ -0.87
Sssca1P56873 Gm18711-201ENSMUST00000199341 750 ntBASIC9.62□□□□□ -0.87
Sssca1P56873 Gm9794-201ENSMUST00000202370 423 ntBASIC9.62□□□□□ -0.87
Sssca1P56873 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.62□□□□□ -0.87
Sssca1P56873 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Sssca1P56873 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC9.62□□□□□ -0.87
Sssca1P56873 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.62□□□□□ -0.87
Sssca1P56873 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
Sssca1P56873 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Sssca1P56873 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.62□□□□□ -0.87
Sssca1P56873 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Sssca1P56873 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sssca1P56873 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Sssca1P56873 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Sssca1P56873 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Sssca1P56873 Gm12058-201ENSMUST00000118614 437 ntBASIC9.61□□□□□ -0.87
Sssca1P56873 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.61□□□□□ -0.87
Sssca1P56873 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.61□□□□□ -0.87
Sssca1P56873 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.61□□□□□ -0.87
Sssca1P56873 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Sssca1P56873 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Sssca1P56873 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Gm29127-201ENSMUST00000188304 517 ntBASIC9.61□□□□□ -0.87
Sssca1P56873 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.61□□□□□ -0.87
Sssca1P56873 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC9.61□□□□□ -0.87
Sssca1P56873 Gm40466-201ENSMUST00000212174 422 ntBASIC9.61□□□□□ -0.87
Sssca1P56873 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.61□□□□□ -0.87
Sssca1P56873 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.61□□□□□ -0.87
Sssca1P56873 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Sssca1P56873 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Sssca1P56873 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sssca1P56873 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sssca1P56873 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC9.6□□□□□ -0.87
Sssca1P56873 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.6□□□□□ -0.87
Sssca1P56873 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 135.6 ms