Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sox3P53784 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.48□□□□□ -0.57
Sox3P53784 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sox3P53784 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox3P53784 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox3P53784 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.47□□□□□ -0.57
Sox3P53784 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sox3P53784 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sox3P53784 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.47□□□□□ -0.57
Sox3P53784 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.47□□□□□ -0.57
Sox3P53784 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.47□□□□□ -0.57
Sox3P53784 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.47□□□□□ -0.57
Sox3P53784 Mir1901-201ENSMUST00000122616 78 ntBASIC11.47□□□□□ -0.57
Sox3P53784 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Gm15881-201ENSMUST00000148792 942 ntBASIC11.47□□□□□ -0.57
Sox3P53784 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Sox3P53784 Gm19187-201ENSMUST00000206781 892 ntBASIC11.47□□□□□ -0.57
Sox3P53784 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.47□□□□□ -0.57
Sox3P53784 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.47□□□□□ -0.57
Sox3P53784 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sox3P53784 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Sox3P53784 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.47□□□□□ -0.57
Sox3P53784 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sox3P53784 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sox3P53784 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox3P53784 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sox3P53784 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sox3P53784 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sox3P53784 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
Sox3P53784 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox3P53784 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sox3P53784 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox3P53784 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sox3P53784 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sox3P53784 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sox3P53784 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.46□□□□□ -0.57
Sox3P53784 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.46□□□□□ -0.57
Sox3P53784 Gm28071-201ENSMUST00000190355 478 ntBASIC11.46□□□□□ -0.57
Sox3P53784 Gm34023-201ENSMUST00000195539 217 ntBASIC11.46□□□□□ -0.57
Sox3P53784 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.46□□□□□ -0.57
Sox3P53784 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.46□□□□□ -0.57
Sox3P53784 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.46□□□□□ -0.57
Sox3P53784 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox3P53784 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox3P53784 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox3P53784 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sox3P53784 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Sox3P53784 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox3P53784 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox3P53784 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox3P53784 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox3P53784 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox3P53784 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sox3P53784 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sox3P53784 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox3P53784 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms