Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LmnaP48678 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.54□□□□□ -0.4
LmnaP48678 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.54□□□□□ -0.4
LmnaP48678 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.54□□□□□ -0.4
LmnaP48678 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.54□□□□□ -0.4
LmnaP48678 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LmnaP48678 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.54□□□□□ -0.4
LmnaP48678 Gm43916-201ENSMUST00000205062 967 ntBASIC12.54□□□□□ -0.4
LmnaP48678 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.54□□□□□ -0.4
LmnaP48678 Gm45072-201ENSMUST00000208673 929 ntBASIC12.54□□□□□ -0.4
LmnaP48678 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
LmnaP48678 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.54□□□□□ -0.4
LmnaP48678 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.54□□□□□ -0.4
LmnaP48678 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.54□□□□□ -0.4
LmnaP48678 Mir339-201ENSMUST00000083659 96 ntBASIC12.54□□□□□ -0.4
LmnaP48678 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.54□□□□□ -0.4
LmnaP48678 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LmnaP48678 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.54□□□□□ -0.4
LmnaP48678 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.53□□□□□ -0.4
LmnaP48678 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
LmnaP48678 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Daam2-202ENSMUST00000224595 1926 ntBASIC12.53□□□□□ -0.4
LmnaP48678 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Gm25880-201ENSMUST00000104331 132 ntBASIC12.53□□□□□ -0.4
LmnaP48678 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
LmnaP48678 Gm15626-201ENSMUST00000117478 868 ntBASIC12.53□□□□□ -0.4
LmnaP48678 Gm14539-201ENSMUST00000117527 174 ntBASIC12.53□□□□□ -0.4
LmnaP48678 Gm13045-201ENSMUST00000119019 712 ntBASIC12.53□□□□□ -0.4
LmnaP48678 Gm11450-201ENSMUST00000121144 333 ntBASIC12.53□□□□□ -0.4
LmnaP48678 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.53□□□□□ -0.4
LmnaP48678 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.53□□□□□ -0.4
LmnaP48678 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.53□□□□□ -0.4
LmnaP48678 Gm9358-201ENSMUST00000183067 927 ntBASIC12.53□□□□□ -0.4
LmnaP48678 Gm32999-201ENSMUST00000192693 562 ntBASIC12.53□□□□□ -0.4
LmnaP48678 Gm38092-201ENSMUST00000195600 653 ntBASIC12.53□□□□□ -0.4
LmnaP48678 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.53□□□□□ -0.4
LmnaP48678 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.53□□□□□ -0.4
LmnaP48678 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.53□□□□□ -0.4
LmnaP48678 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
LmnaP48678 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LmnaP48678 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.53□□□□□ -0.4
LmnaP48678 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LmnaP48678 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LmnaP48678 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LmnaP48678 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
LmnaP48678 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LmnaP48678 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
LmnaP48678 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LmnaP48678 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
LmnaP48678 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LmnaP48678 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
LmnaP48678 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LmnaP48678 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.52□□□□□ -0.41
LmnaP48678 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LmnaP48678 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LmnaP48678 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LmnaP48678 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LmnaP48678 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.52□□□□□ -0.41
LmnaP48678 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.52□□□□□ -0.41
LmnaP48678 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms