Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Gm8815-201ENSMUST00000173809 620 ntBASIC11.3□□□□□ -0.6
Nkx2-6P43688 Gm17831-201ENSMUST00000205579 900 ntBASIC11.3□□□□□ -0.6
Nkx2-6P43688 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Gm9797-202ENSMUST00000218003 294 ntBASIC11.3□□□□□ -0.6
Nkx2-6P43688 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.3□□□□□ -0.6
Nkx2-6P43688 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.3□□□□□ -0.6
Nkx2-6P43688 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.3□□□□□ -0.6
Nkx2-6P43688 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.3□□□□□ -0.6
Nkx2-6P43688 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Nkx2-6P43688 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Nkx2-6P43688 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Gm15004-201ENSMUST00000119192 630 ntBASIC11.29□□□□□ -0.6
Nkx2-6P43688 Gm11667-201ENSMUST00000119828 486 ntBASIC11.29□□□□□ -0.6
Nkx2-6P43688 Gm14460-201ENSMUST00000121511 639 ntBASIC11.29□□□□□ -0.6
Nkx2-6P43688 Gm14665-201ENSMUST00000122294 557 ntBASIC11.29□□□□□ -0.6
Nkx2-6P43688 Gm7666-201ENSMUST00000146631 819 ntBASIC11.29□□□□□ -0.6
Nkx2-6P43688 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.29□□□□□ -0.6
Nkx2-6P43688 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.29□□□□□ -0.6
Nkx2-6P43688 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Gm18893-201ENSMUST00000198416 943 ntBASIC11.29□□□□□ -0.6
Nkx2-6P43688 Gm44126-201ENSMUST00000204831 514 ntBASIC11.29□□□□□ -0.6
Nkx2-6P43688 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Gm45398-201ENSMUST00000210561 165 ntBASIC11.29□□□□□ -0.6
Nkx2-6P43688 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.29□□□□□ -0.6
Nkx2-6P43688 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-6P43688 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.28□□□□□ -0.6
Nkx2-6P43688 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Gm12029-201ENSMUST00000120073 832 ntBASIC11.28□□□□□ -0.6
Nkx2-6P43688 Gm15595-201ENSMUST00000120840 961 ntBASIC11.28□□□□□ -0.6
Nkx2-6P43688 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.28□□□□□ -0.6
Nkx2-6P43688 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Gm27530-201ENSMUST00000184096 98 ntBASIC11.28□□□□□ -0.6
Nkx2-6P43688 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.28□□□□□ -0.6
Nkx2-6P43688 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.28□□□□□ -0.6
Nkx2-6P43688 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkx2-6P43688 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.28□□□□□ -0.6
Nkx2-6P43688 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nkx2-6P43688 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms