Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm11618-201ENSMUST00000117946 267 ntBASIC10.96□□□□□ -0.65
Nedd8P29595 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.96□□□□□ -0.65
Nedd8P29595 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.96□□□□□ -0.65
Nedd8P29595 Gm22175-201ENSMUST00000175007 78 ntBASIC10.96□□□□□ -0.65
Nedd8P29595 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Nedd8P29595 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.96□□□□□ -0.65
Nedd8P29595 Gm43002-201ENSMUST00000200310 155 ntBASIC10.96□□□□□ -0.65
Nedd8P29595 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.96□□□□□ -0.65
Nedd8P29595 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nedd8P29595 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nedd8P29595 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nedd8P29595 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nedd8P29595 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nedd8P29595 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nedd8P29595 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nedd8P29595 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nedd8P29595 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Nedd8P29595 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nedd8P29595 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nedd8P29595 Erich3-203ENSMUST00000189969 3460 ntBASIC10.96□□□□□ -0.66
Nedd8P29595 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nedd8P29595 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nedd8P29595 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nedd8P29595 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nedd8P29595 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nedd8P29595 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.95□□□□□ -0.66
Nedd8P29595 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.95□□□□□ -0.66
Nedd8P29595 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.95□□□□□ -0.66
Nedd8P29595 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.95□□□□□ -0.66
Nedd8P29595 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nedd8P29595 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Nedd8P29595 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Nedd8P29595 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.95□□□□□ -0.66
Nedd8P29595 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.95□□□□□ -0.66
Nedd8P29595 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Gm13223-201ENSMUST00000118609 747 ntBASIC10.95□□□□□ -0.66
Nedd8P29595 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.95□□□□□ -0.66
Nedd8P29595 Gm23119-201ENSMUST00000158610 140 ntBASIC10.95□□□□□ -0.66
Nedd8P29595 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Gm5354-201ENSMUST00000182417 973 ntBASIC10.95□□□□□ -0.66
Nedd8P29595 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.95□□□□□ -0.66
Nedd8P29595 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.95□□□□□ -0.66
Nedd8P29595 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.95□□□□□ -0.66
Nedd8P29595 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nedd8P29595 Gm6007-201ENSMUST00000208170 823 ntBASIC10.95□□□□□ -0.66
Nedd8P29595 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nedd8P29595 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.95□□□□□ -0.66
Nedd8P29595 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.95□□□□□ -0.66
Nedd8P29595 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nedd8P29595 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Nedd8P29595 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Nedd8P29595 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Nedd8P29595 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nedd8P29595 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nedd8P29595 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nedd8P29595 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.94□□□□□ -0.66
Nedd8P29595 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nedd8P29595 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nedd8P29595 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.94□□□□□ -0.66
Nedd8P29595 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nedd8P29595 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nedd8P29595 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.94□□□□□ -0.66
Nedd8P29595 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nedd8P29595 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms