Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cd40lgP27548 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cd40lgP27548 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cd40lgP27548 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.07□□□□□ -0.64
Cd40lgP27548 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.07□□□□□ -0.64
Cd40lgP27548 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.07□□□□□ -0.64
Cd40lgP27548 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.07□□□□□ -0.64
Cd40lgP27548 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cd40lgP27548 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.07□□□□□ -0.64
Cd40lgP27548 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Gm13296-201ENSMUST00000117854 997 ntBASIC11.07□□□□□ -0.64
Cd40lgP27548 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Gm15808-201ENSMUST00000119046 604 ntBASIC11.07□□□□□ -0.64
Cd40lgP27548 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.07□□□□□ -0.64
Cd40lgP27548 Gm5070-201ENSMUST00000177599 862 ntBASIC11.07□□□□□ -0.64
Cd40lgP27548 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cd40lgP27548 Gm4857-201ENSMUST00000192718 785 ntBASIC11.07□□□□□ -0.64
Cd40lgP27548 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.07□□□□□ -0.64
Cd40lgP27548 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.07□□□□□ -0.64
Cd40lgP27548 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Gm9996-201ENSMUST00000070359 913 ntBASIC11.07□□□□□ -0.64
Cd40lgP27548 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cd40lgP27548 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.07□□□□□ -0.64
Cd40lgP27548 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cd40lgP27548 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.07□□□□□ -0.64
Cd40lgP27548 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cd40lgP27548 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.07□□□□□ -0.64
Cd40lgP27548 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd40lgP27548 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cd40lgP27548 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.06□□□□□ -0.64
Cd40lgP27548 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cd40lgP27548 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.06□□□□□ -0.64
Cd40lgP27548 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cd40lgP27548 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.06□□□□□ -0.64
Cd40lgP27548 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.06□□□□□ -0.64
Cd40lgP27548 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Gm9230-201ENSMUST00000188228 532 ntBASIC11.06□□□□□ -0.64
Cd40lgP27548 Rprl1-202ENSMUST00000198476 238 ntBASIC11.06□□□□□ -0.64
Cd40lgP27548 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.06□□□□□ -0.64
Cd40lgP27548 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.06□□□□□ -0.64
Cd40lgP27548 Gzmn-202ENSMUST00000225535 989 ntBASIC11.06□□□□□ -0.64
Cd40lgP27548 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Cd40lgP27548 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cd40lgP27548 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cd40lgP27548 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cd40lgP27548 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms