Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Gm43630-201ENSMUST00000201550 776 ntBASIC11.23□□□□□ -0.61
Clk1P22518 Gm21769-201ENSMUST00000211922 111 ntBASIC11.23□□□□□ -0.61
Clk1P22518 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.23□□□□□ -0.61
Clk1P22518 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.23□□□□□ -0.61
Clk1P22518 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.23□□□□□ -0.61
Clk1P22518 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Clk1P22518 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Clk1P22518 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Clk1P22518 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Clk1P22518 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Clk1P22518 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.23□□□□□ -0.61
Clk1P22518 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Clk1P22518 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Clk1P22518 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Clk1P22518 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.22□□□□□ -0.61
Clk1P22518 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Clk1P22518 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Clk1P22518 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Clk1P22518 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.22□□□□□ -0.61
Clk1P22518 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.22□□□□□ -0.61
Clk1P22518 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.22□□□□□ -0.61
Clk1P22518 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.22□□□□□ -0.61
Clk1P22518 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.22□□□□□ -0.61
Clk1P22518 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Clk1P22518 Gm27501-201ENSMUST00000183599 107 ntBASIC11.22□□□□□ -0.61
Clk1P22518 Gm27390-201ENSMUST00000184516 176 ntBASIC11.22□□□□□ -0.61
Clk1P22518 Gm28882-201ENSMUST00000185504 314 ntBASIC11.22□□□□□ -0.61
Clk1P22518 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.22□□□□□ -0.61
Clk1P22518 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.22□□□□□ -0.61
Clk1P22518 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Clk1P22518 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.22□□□□□ -0.61
Clk1P22518 Gm5950-201ENSMUST00000213337 772 ntBASIC11.22□□□□□ -0.61
Clk1P22518 Gm10608-202ENSMUST00000213924 676 ntBASIC11.22□□□□□ -0.61
Clk1P22518 Gm39404-201ENSMUST00000216350 313 ntBASIC11.22□□□□□ -0.61
Clk1P22518 Gm9368-201ENSMUST00000219348 831 ntBASIC11.22□□□□□ -0.61
Clk1P22518 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.22□□□□□ -0.61
Clk1P22518 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.22□□□□□ -0.61
Clk1P22518 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Clk1P22518 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Clk1P22518 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Clk1P22518 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Clk1P22518 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.22□□□□□ -0.61
Clk1P22518 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Clk1P22518 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Clk1P22518 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.22□□□□□ -0.61
Clk1P22518 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clk1P22518 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.21□□□□□ -0.61
Clk1P22518 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.21□□□□□ -0.61
Clk1P22518 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clk1P22518 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms