Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
BdnfP21237 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.48□□□□□ -0.57
BdnfP21237 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.48□□□□□ -0.57
BdnfP21237 Gm22018-201ENSMUST00000104357 131 ntBASIC11.48□□□□□ -0.57
BdnfP21237 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.48□□□□□ -0.57
BdnfP21237 Gm13875-201ENSMUST00000120162 282 ntBASIC11.48□□□□□ -0.57
BdnfP21237 Gm13316-201ENSMUST00000140537 691 ntBASIC11.48□□□□□ -0.57
BdnfP21237 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Mir1982-201ENSMUST00000157368 74 ntBASIC11.48□□□□□ -0.57
BdnfP21237 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.48□□□□□ -0.57
BdnfP21237 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Gm42937-201ENSMUST00000197360 752 ntBASIC11.48□□□□□ -0.57
BdnfP21237 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
BdnfP21237 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.48□□□□□ -0.57
BdnfP21237 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.48□□□□□ -0.57
BdnfP21237 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.48□□□□□ -0.57
BdnfP21237 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
BdnfP21237 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.48□□□□□ -0.57
BdnfP21237 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Gm26670-201ENSMUST00000180429 3287 ntBASIC11.47□□□□□ -0.57
BdnfP21237 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.47□□□□□ -0.57
BdnfP21237 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Gm10764-202ENSMUST00000220397 2335 ntBASIC11.47□□□□□ -0.57
BdnfP21237 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.47□□□□□ -0.57
BdnfP21237 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
BdnfP21237 Gm23931-201ENSMUST00000103842 109 ntBASIC11.47□□□□□ -0.57
BdnfP21237 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.47□□□□□ -0.57
BdnfP21237 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Gm24548-201ENSMUST00000158650 108 ntBASIC11.47□□□□□ -0.57
BdnfP21237 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.47□□□□□ -0.57
BdnfP21237 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
BdnfP21237 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.47□□□□□ -0.57
BdnfP21237 Gm18187-201ENSMUST00000196476 984 ntBASIC11.47□□□□□ -0.57
BdnfP21237 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.47□□□□□ -0.57
BdnfP21237 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.47□□□□□ -0.57
BdnfP21237 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
BdnfP21237 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
BdnfP21237 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
BdnfP21237 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
BdnfP21237 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC11.46□□□□□ -0.57
BdnfP21237 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
BdnfP21237 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.46□□□□□ -0.57
BdnfP21237 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
BdnfP21237 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
BdnfP21237 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
BdnfP21237 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.46□□□□□ -0.57
BdnfP21237 Gm12036-201ENSMUST00000120008 530 ntBASIC11.46□□□□□ -0.57
BdnfP21237 Gm14999-201ENSMUST00000121039 624 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms